BRAID
Data Integration Module
In PubMed:      " Chloramphenicol "
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Title:
Hydroxyurea induces hydroxyl radical-mediated cell death in Escherichia coli.
Journal:
Molecular cell. 2009 Dec;36(5):845-60
Authors:
Davies BW, Kohanski MA, Simmons LA, Winkler JA, Collins JJ, Walker GC.
Abstract:
Hydroxyurea (HU) specifically inhibits class I ribonucleotide reductase (RNR), depleting dNTP pools and leading to replication fork arrest. Although HU inhibition of RNR is well recognized, the mechanism by which it leads to cell death remains unknown. To investigate the mechanism of HU-induced cell death, we used a systems-level approach to determine the genomic and physiological responses of E. coli to HU treatment. Our results suggest a model by which HU treatment rapidly induces a set of protective responses to manage genomic instability. Continued HU stress activates iron uptake and toxins MazF and RelE, whose activity causes the synthesis of incompletely translated proteins and stimulation of envelope stress responses. These effects alter the properties of one of the cell's terminal cytochrome oxidases, causing an increase in superoxide production. The increased superoxide production, together with the increased iron uptake, fuels the formation of hydroxyl radicals that contribute to HU-induced cell death.
See full PubMed entry: http://www.ncbi.nlm.nih.gov/pubmed/20005847
BRAID Data Integration Module is based on an improved version of the algorithm reported in the following reference.
Primary citation: Abdelkrim Rachedi et al., GABAagent: a system for integrating data on GABA receptors. Bioinformatics. 2000 Apr;16(4):301-12.