Finding GlcSFMs for Glucides in the PDB entry '1ZM1' ... |
PDB Entry | Title | Determination Method | Resolution | R-Factor |
1ZM1 | Crystal structures of complex F. succinogenes 1,3-1,4-beta-D-glucanase and beta-1,3-1,4-cellotriose | X-RAY | 2.30 | 0.180
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| 1ZM1 has 5 GlcSFMs: |
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| Motif No. / Chain | Motif | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: LLSLLL
+3w
> Sequence: NERWTF
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BGC /(300) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | No SSE | 44 | ASN | ND2 | C2 | A | 300 | 3.48 | H.Bond | A | No SSE | 44 | ASN | ND2 | O2 | A | 300 | 3.09 | H.Bond | A | No SSE | 44 | ASN | ND2 | O3 | A | 300 | 3.65 | H.Bond | A | No SSE | 47 | GLU | CG | O5 | A | 300 | 3.92 | van der Waals | A | 135-142 S: -1 | 137 | ARG | CZ | O2 | A | 300 | 3.68 | van der Waals | A | 135-142 S: -1 | 137 | ARG | NH1 | O2 | A | 300 | 2.82 | H.Bond | A | 135-142 S: -1 | 137 | ARG | NH2 | O2 | A | 300 | 3.7 | H.Bond | A | No SSE | 203 | TRP | CG | C5 | A | 300 | 3.95 | van der Waals | A | No SSE | 203 | TRP | CD1 | C5 | A | 300 | 3.69 | van der Waals | A | No SSE | 203 | TRP | CD2 | C3 | A | 300 | 3.98 | van der Waals | A | No SSE | 203 | TRP | NE1 | C5 | A | 300 | 3.98 | H.Bond | A | No SSE | 203 | TRP | NE1 | C1 | A | 300 | 3.54 | H.Bond | A | No SSE | 203 | TRP | CE2 | C3 | A | 300 | 3.89 | van der Waals | A | No SSE | 203 | TRP | CE2 | C1 | A | 300 | 3.92 | van der Waals | A | No SSE | 203 | TRP | CZ2 | O2 | A | 300 | 3.68 | van der Waals | A | No SSE | 204 | THR | O | C6 | A | 300 | 3.91 | van der Waals | A | No SSE | 204 | THR | O | O6 | A | 300 | 3.16 | H.Bond | A | No SSE | 205 | PHE | CB | O6 | A | 300 | 3.87 | van der Waals | A | Water | 548 | HOH | O | C2 | A | 300 | 3.6 | van der Waals | A | Water | 548 | HOH | O | C3 | A | 300 | 3.4 | van der Waals | A | Water | 548 | HOH | O | O2 | A | 300 | 2.72 | H.Bond | A | Water | 548 | HOH | O | O3 | A | 300 | 2.78 | H.Bond | A | Water | 550 | HOH | O | C2 | A | 300 | 3.64 | van der Waals | A | Water | 550 | HOH | O | C3 | A | 300 | 3.61 | van der Waals | A | Water | 550 | HOH | O | C4 | A | 300 | 3.86 | van der Waals | A | Water | 550 | HOH | O | O3 | A | 300 | 2.87 | H.Bond | A | Water | 555 | HOH | O | C3 | A | 300 | 3.71 | van der Waals | A | Water | 555 | HOH | O | O3 | A | 300 | 2.8 | H.Bond | A | Water | 555 | HOH | O | O4 | A | 300 | 3.36 | H.Bond | |
| 2 / A |
> Structure: SSLLSLL
> Sequence: EYEWRWF
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BGC /(301) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | 7-14 S: -1 | 11 | GLU | CD | C6 | A | 301 | 3.62 | van der Waals | A | 7-14 S: -1 | 11 | GLU | CD | O6 | A | 301 | 3.17 | van der Waals | A | 7-14 S: -1 | 11 | GLU | OE1 | C6 | A | 301 | 2.99 | van der Waals | A | 7-14 S: -1 | 11 | GLU | OE1 | O6 | A | 301 | 3.04 | H.Bond | A | 7-14 S: -1 | 11 | GLU | OE2 | C6 | A | 301 | 3.44 | van der Waals | A | 7-14 S: -1 | 11 | GLU | OE2 | O6 | A | 301 | 2.59 | H.Bond | A | 35-42 S: -1 | 42 | TYR | CE2 | C5 | A | 301 | 3.91 | van der Waals | A | 35-42 S: -1 | 42 | TYR | CE2 | O4 | A | 301 | 3.71 | van der Waals | A | 35-42 S: -1 | 42 | TYR | CZ | C5 | A | 301 | 3.78 | van der Waals | A | 35-42 S: -1 | 42 | TYR | CZ | O4 | A | 301 | 3.83 | van der Waals | A | 35-42 S: -1 | 42 | TYR | OH | C3 | A | 301 | 3.38 | van der Waals | A | 35-42 S: -1 | 42 | TYR | OH | C4 | A | 301 | 3.77 | van der Waals | A | 35-42 S: -1 | 42 | TYR | OH | C5 | A | 301 | 3.93 | van der Waals | A | 35-42 S: -1 | 42 | TYR | OH | O4 | A | 301 | 3.44 | H.Bond | A | No SSE | 47 | GLU | CB | C3 | A | 301 | 3.99 | van der Waals | A | No SSE | 47 | GLU | CB | O3 | A | 301 | 3.49 | van der Waals | A | No SSE | 47 | GLU | CG | O3 | A | 301 | 3.67 | van der Waals | A | No SSE | 47 | GLU | OE1 | O4 | A | 301 | 3.62 | H.Bond | A | No SSE | 54 | TRP | CZ2 | O2 | A | 301 | 3.78 | van der Waals | A | No SSE | 54 | TRP | CH2 | O2 | A | 301 | 3.59 | van der Waals | A | 135-142 S: -1 | 137 | ARG | NH1 | C6 | A | 301 | 3.57 | H.Bond | A | No SSE | 203 | TRP | NE1 | O6 | A | 301 | 3.1 | H.Bond | A | No SSE | 203 | TRP | CE2 | O6 | A | 301 | 3.82 | van der Waals | A | No SSE | 203 | TRP | CZ2 | O6 | A | 301 | 3.86 | van der Waals | A | No SSE | 205 | PHE | CB | O3 | A | 301 | 3.73 | van der Waals | A | No SSE | 205 | PHE | CG | C2 | A | 301 | 3.91 | van der Waals | A | No SSE | 205 | PHE | CD2 | C2 | A | 301 | 3.86 | van der Waals | A | No SSE | 205 | PHE | CE2 | O5 | A | 301 | 3.93 | van der Waals | A | No SSE | 205 | PHE | CE2 | O6 | A | 301 | 3.95 | van der Waals | |
| 3 / A |
> Structure: SLSSS
+2w
> Sequence: VSFWEDEINW
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BGC /(302) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | 35-42 S: -1 | 36 | VAL | CG1 | O6 | A | 302 | 3.58 | van der Waals | A | 35-42 S: -1 | 38 | SER | OG | C6 | A | 302 | 3.63 | van der Waals | A | 35-42 S: -1 | 38 | SER | OG | O6 | A | 302 | 3.88 | H.Bond | A | 35-42 S: -1 | 40 | PHE | CE2 | O4 | A | 302 | 3.74 | van der Waals | A | 35-42 S: -1 | 40 | PHE | CZ | O4 | A | 302 | 3.45 | van der Waals | A | No SSE | 54 | TRP | CZ2 | O2 | A | 302 | 3.5 | van der Waals | A | 56-62 S: -1 | 56 | GLU | CD | C2 | A | 302 | 3.94 | van der Waals | A | 56-62 S: -1 | 56 | GLU | CD | C1 | A | 302 | 3.73 | van der Waals | A | 56-62 S: -1 | 56 | GLU | CD | O2 | A | 302 | 3.48 | van der Waals | A | 56-62 S: -1 | 56 | GLU | OE1 | C2 | A | 302 | 3.32 | van der Waals | A | 56-62 S: -1 | 56 | GLU | OE1 | C3 | A | 302 | 3.29 | van der Waals | A | 56-62 S: -1 | 56 | GLU | OE1 | C4 | A | 302 | 3.85 | van der Waals | A | 56-62 S: -1 | 56 | GLU | OE1 | C5 | A | 302 | 3.27 | van der Waals | A | 56-62 S: -1 | 56 | GLU | OE1 | C1 | A | 302 | 2.92 | van der Waals | A | 56-62 S: -1 | 56 | GLU | OE1 | O2 | A | 302 | 3.33 | H.Bond | A | 56-62 S: -1 | 56 | GLU | OE1 | O5 | A | 302 | 3.53 | H.Bond | A | 56-62 S: -1 | 56 | GLU | OE2 | C2 | A | 302 | 3.76 | van der Waals | A | 56-62 S: -1 | 56 | GLU | OE2 | C1 | A | 302 | 3.92 | van der Waals | A | 56-62 S: -1 | 56 | GLU | OE2 | O2 | A | 302 | 2.88 | H.Bond | A | 56-62 S: -1 | 58 | ASP | OD1 | C5 | A | 302 | 3.95 | van der Waals | A | 56-62 S: -1 | 58 | ASP | OD2 | C1 | A | 302 | 3.96 | van der Waals | A | 56-62 S: -1 | 60 | GLU | CG | C6 | A | 302 | 3.9 | van der Waals | A | 56-62 S: -1 | 60 | GLU | CD | C6 | A | 302 | 3.61 | van der Waals | A | 56-62 S: -1 | 60 | GLU | CD | O5 | A | 302 | 3.49 | van der Waals | A | 56-62 S: -1 | 60 | GLU | CD | O6 | A | 302 | 3.82 | van der Waals | A | 56-62 S: -1 | 60 | GLU | OE1 | O5 | A | 302 | 3.82 | H.Bond | A | 56-62 S: -1 | 60 | GLU | OE2 | C5 | A | 302 | 3.53 | van der Waals | A | 56-62 S: -1 | 60 | GLU | OE2 | C6 | A | 302 | 3.01 | van der Waals | A | 56-62 S: -1 | 60 | GLU | OE2 | O5 | A | 302 | 2.83 | H.Bond | A | 56-62 S: -1 | 60 | GLU | OE2 | O6 | A | 302 | 2.88 | H.Bond | A | 68-77 S: -1 | 74 | ILE | CD1 | O1 | A | 302 | 3.6 | van der Waals | A | 68-77 S: -1 | 74 | ILE | CD1 | O2 | A | 302 | 3.78 | van der Waals | A | 135-142 S: -1 | 139 | ASN | CG | O4 | A | 302 | 3.99 | van der Waals | A | 135-142 S: -1 | 139 | ASN | OD1 | C6 | A | 302 | 3.86 | van der Waals | A | 135-142 S: -1 | 139 | ASN | OD1 | O6 | A | 302 | 3.45 | H.Bond | A | 135-142 S: -1 | 139 | ASN | ND2 | O4 | A | 302 | 2.88 | H.Bond | A | 135-142 S: -1 | 139 | ASN | ND2 | O6 | A | 302 | 3.92 | H.Bond | A | 135-142 S: -1 | 141 | TRP | NE1 | O6 | A | 302 | 2.87 | H.Bond | A | 135-142 S: -1 | 141 | TRP | CE2 | O6 | A | 302 | 3.37 | van der Waals | A | 135-142 S: -1 | 141 | TRP | CZ2 | O6 | A | 302 | 3.25 | van der Waals | A | Water | 409 | HOH | O | C2 | A | 302 | 3.52 | van der Waals | A | Water | 409 | HOH | O | O2 | A | 302 | 2.7 | H.Bond | A | Water | 517 | HOH | O | C1 | A | 302 | 3.32 | van der Waals | A | Water | 517 | HOH | O | O1 | A | 302 | 2.64 | H.Bond | A | Water | 517 | HOH | O | O5 | A | 302 | 3.49 | H.Bond | |
| 4 / B |
> Structure: SLLSLL
+3w
> Sequence: YNERWT
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BGC /(300) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | 35-42 S: -1 | 42 | TYR | CE2 | O2 | B | 300 | 3.99 | van der Waals | B | No SSE | 44 | ASN | CG | O2 | B | 300 | 3.92 | van der Waals | B | No SSE | 44 | ASN | ND2 | C2 | B | 300 | 3.38 | H.Bond | B | No SSE | 44 | ASN | ND2 | O2 | B | 300 | 2.86 | H.Bond | B | No SSE | 44 | ASN | ND2 | O3 | B | 300 | 3.63 | H.Bond | B | No SSE | 47 | GLU | CG | O5 | B | 300 | 3.7 | van der Waals | B | No SSE | 47 | GLU | CD | C2 | B | 300 | 3.88 | van der Waals | B | No SSE | 47 | GLU | CD | O5 | B | 300 | 3.84 | van der Waals | B | No SSE | 47 | GLU | OE1 | C2 | B | 300 | 3.91 | van der Waals | B | No SSE | 47 | GLU | OE2 | C2 | B | 300 | 3.83 | van der Waals | B | 135-142 S: -1 | 137 | ARG | CZ | O2 | B | 300 | 3.71 | van der Waals | B | 135-142 S: -1 | 137 | ARG | NH1 | O2 | B | 300 | 3.82 | H.Bond | B | 135-142 S: -1 | 137 | ARG | NH2 | O2 | B | 300 | 2.81 | H.Bond | B | No SSE | 203 | TRP | CG | C5 | B | 300 | 3.71 | van der Waals | B | No SSE | 203 | TRP | CD1 | C5 | B | 300 | 3.61 | van der Waals | B | No SSE | 203 | TRP | CD2 | C3 | B | 300 | 3.81 | van der Waals | B | No SSE | 203 | TRP | CD2 | O4 | B | 300 | 3.97 | van der Waals | B | No SSE | 203 | TRP | NE1 | C5 | B | 300 | 3.89 | H.Bond | B | No SSE | 203 | TRP | NE1 | C1 | B | 300 | 3.5 | H.Bond | B | No SSE | 203 | TRP | CE2 | C3 | B | 300 | 3.75 | van der Waals | B | No SSE | 203 | TRP | CE2 | C1 | B | 300 | 3.77 | van der Waals | B | No SSE | 203 | TRP | CZ2 | C3 | B | 300 | 3.91 | van der Waals | B | No SSE | 203 | TRP | CZ2 | O2 | B | 300 | 3.6 | van der Waals | B | No SSE | 204 | THR | O | O6 | B | 300 | 3.22 | H.Bond | B | Water | 1409 | HOH | O | C2 | B | 300 | 3.94 | van der Waals | B | Water | 1409 | HOH | O | C3 | B | 300 | 3.6 | van der Waals | B | Water | 1409 | HOH | O | O2 | B | 300 | 3.17 | H.Bond | B | Water | 1409 | HOH | O | O3 | B | 300 | 2.85 | H.Bond | B | Water | 1456 | HOH | O | C4 | B | 300 | 3.71 | van der Waals | B | Water | 1456 | HOH | O | C6 | B | 300 | 3.8 | van der Waals | B | Water | 1497 | HOH | O | O6 | B | 300 | 3.11 | H.Bond | |
| 5 / B |
> Structure: SSLLSLL
+3w
> Sequence: EYEWRWF
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BGC /(301) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | 7-14 S: -1 | 11 | GLU | CD | C6 | B | 301 | 3.68 | van der Waals | B | 7-14 S: -1 | 11 | GLU | CD | O6 | B | 301 | 3.22 | van der Waals | B | 7-14 S: -1 | 11 | GLU | OE1 | C6 | B | 301 | 3.31 | van der Waals | B | 7-14 S: -1 | 11 | GLU | OE1 | O6 | B | 301 | 2.55 | H.Bond | B | 7-14 S: -1 | 11 | GLU | OE2 | C6 | B | 301 | 3.23 | van der Waals | B | 7-14 S: -1 | 11 | GLU | OE2 | O6 | B | 301 | 3.15 | H.Bond | B | 35-42 S: -1 | 42 | TYR | CE2 | C5 | B | 301 | 3.96 | van der Waals | B | 35-42 S: -1 | 42 | TYR | CE2 | O4 | B | 301 | 3.82 | van der Waals | B | 35-42 S: -1 | 42 | TYR | CZ | C5 | B | 301 | 3.78 | van der Waals | B | 35-42 S: -1 | 42 | TYR | CZ | O4 | B | 301 | 3.87 | van der Waals | B | 35-42 S: -1 | 42 | TYR | OH | C3 | B | 301 | 3.63 | van der Waals | B | 35-42 S: -1 | 42 | TYR | OH | C4 | B | 301 | 3.85 | van der Waals | B | 35-42 S: -1 | 42 | TYR | OH | C5 | B | 301 | 3.92 | van der Waals | B | 35-42 S: -1 | 42 | TYR | OH | O4 | B | 301 | 3.44 | H.Bond | B | No SSE | 47 | GLU | CB | C3 | B | 301 | 3.87 | van der Waals | B | No SSE | 47 | GLU | CB | O3 | B | 301 | 3.5 | van der Waals | B | No SSE | 47 | GLU | CG | O3 | B | 301 | 3.73 | van der Waals | B | No SSE | 47 | GLU | CD | O4 | B | 301 | 3.88 | van der Waals | B | No SSE | 47 | GLU | OE1 | O4 | B | 301 | 3.58 | H.Bond | B | No SSE | 54 | TRP | CH2 | O2 | B | 301 | 3.77 | van der Waals | B | 135-142 S: -1 | 137 | ARG | NH2 | C6 | B | 301 | 3.75 | H.Bond | B | No SSE | 203 | TRP | NE1 | C6 | B | 301 | 3.97 | H.Bond | B | No SSE | 203 | TRP | NE1 | O6 | B | 301 | 2.94 | H.Bond | B | No SSE | 203 | TRP | CE2 | O6 | B | 301 | 3.65 | van der Waals | B | No SSE | 203 | TRP | CZ2 | O6 | B | 301 | 3.71 | van der Waals | B | No SSE | 205 | PHE | CG | C2 | B | 301 | 3.95 | van der Waals | B | No SSE | 205 | PHE | CD2 | C2 | B | 301 | 3.83 | van der Waals | B | No SSE | 205 | PHE | CE2 | O5 | B | 301 | 3.98 | van der Waals | B | Water | 1429 | HOH | O | C2 | B | 301 | 3.61 | van der Waals | B | Water | 1429 | HOH | O | C3 | B | 301 | 3.87 | van der Waals | B | Water | 1429 | HOH | O | O2 | B | 301 | 2.64 | H.Bond | B | Water | 1429 | HOH | O | O3 | B | 301 | 3.2 | H.Bond | B | Water | 1486 | HOH | O | O2 | B | 301 | 3.3 | H.Bond | B | Water | 1497 | HOH | O | O3 | B | 301 | 3.04 | H.Bond | |