There are 7 SFM Motifs: |
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Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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4 | 1K7W | Argininosuccinate lyase | x-ray | 1.96 | 0.207
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / C |
> Structure: HLHLHHH
+3w
> Sequence: SHRNVAYQK
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AS1 /(1001) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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C | 29-34 H: 1 | 29 | SER | OG | N4 | C | 1001 | 3.33 | H.Bond | C | 89-103 H: 1 | 91 | HIS | CE1 | C3 | C | 1001 | 3.96 | van der Waals | C | 114-152 H: 1 | 115 | ARG | O | C2 | C | 1001 | 3.86 | van der Waals | C | 114-152 H: 1 | 115 | ARG | CB | C2 | C | 1001 | 3.98 | van der Waals | C | 114-152 H: 1 | 115 | ARG | CB | C1 | C | 1001 | 3.96 | van der Waals | C | 114-152 H: 1 | 115 | ARG | CZ | N3 | C | 1001 | 3.97 | H.Bond | C | 114-152 H: 1 | 115 | ARG | NH2 | N3 | C | 1001 | 3.16 | H.Bond | C | 114-152 H: 1 | 116 | ASN | CG | N2 | C | 1001 | 3.91 | H.Bond | C | 114-152 H: 1 | 116 | ASN | CG | OD2 | C | 1001 | 3.51 | van der Waals | C | 114-152 H: 1 | 116 | ASN | OD1 | C1 | C | 1001 | 3.83 | van der Waals | C | 114-152 H: 1 | 116 | ASN | OD1 | N2 | C | 1001 | 2.68 | H.Bond | C | 114-152 H: 1 | 116 | ASN | OD1 | C | C | 1001 | 3.23 | van der Waals | C | 114-152 H: 1 | 116 | ASN | OD1 | N1 | C | 1001 | 3.18 | H.Bond | C | 114-152 H: 1 | 116 | ASN | OD1 | OD2 | C | 1001 | 3.73 | H.Bond | C | 114-152 H: 1 | 116 | ASN | ND2 | CD | C | 1001 | 3.13 | H.Bond | C | 114-152 H: 1 | 116 | ASN | ND2 | OD1 | C | 1001 | 3.85 | H.Bond | C | 114-152 H: 1 | 116 | ASN | ND2 | OD2 | C | 1001 | 2.49 | H.Bond | C | 114-152 H: 1 | 119 | VAL | CB | C3 | C | 1001 | 3.93 | van der Waals | C | 114-152 H: 1 | 119 | VAL | CG2 | O51 | C | 1001 | 3.81 | van der Waals | C | 114-152 H: 1 | 119 | VAL | CG2 | C3 | C | 1001 | 3.96 | van der Waals | C | No SSE | 205 | ALA | CB | OD1 | C | 1001 | 3.97 | van der Waals | C | No SSE | 323 | TYR | CB | OD2 | C | 1001 | 3.64 | van der Waals | C | No SSE | 323 | TYR | CG | OD2 | C | 1001 | 3.89 | van der Waals | C | No SSE | 323 | TYR | CD2 | N1 | C | 1001 | 3.83 | H.Bond | C | No SSE | 323 | TYR | CD2 | OD2 | C | 1001 | 3.67 | van der Waals | C | No SSE | 323 | TYR | CE1 | O52 | C | 1001 | 3.45 | van der Waals | C | No SSE | 323 | TYR | CE1 | N2 | C | 1001 | 3.93 | H.Bond | C | No SSE | 323 | TYR | CE2 | N2 | C | 1001 | 3.43 | H.Bond | C | No SSE | 323 | TYR | CE2 | C | C | 1001 | 3.52 | van der Waals | C | No SSE | 323 | TYR | CE2 | N1 | C | 1001 | 3.72 | H.Bond | C | No SSE | 323 | TYR | CZ | O52 | C | 1001 | 3.49 | van der Waals | C | No SSE | 323 | TYR | CZ | C2 | C | 1001 | 3.98 | van der Waals | C | No SSE | 323 | TYR | CZ | C1 | C | 1001 | 3.63 | van der Waals | C | No SSE | 323 | TYR | CZ | N2 | C | 1001 | 3.33 | H.Bond | C | No SSE | 323 | TYR | CZ | C | C | 1001 | 3.93 | van der Waals | C | No SSE | 323 | TYR | OH | O52 | C | 1001 | 2.67 | H.Bond | C | No SSE | 323 | TYR | OH | C5 | C | 1001 | 3.39 | van der Waals | C | No SSE | 323 | TYR | OH | C4 | C | 1001 | 3.53 | van der Waals | C | No SSE | 323 | TYR | OH | C2 | C | 1001 | 3.53 | van der Waals | C | No SSE | 323 | TYR | OH | C1 | C | 1001 | 3.27 | van der Waals | C | No SSE | 323 | TYR | OH | N2 | C | 1001 | 3.49 | H.Bond | C | 324-328 H: 5 | 328 | GLN | N | O52 | C | 1001 | 3.88 | H.Bond | C | 324-328 H: 5 | 328 | GLN | CA | O51 | C | 1001 | 3.57 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CA | O52 | C | 1001 | 3.78 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CA | C5 | C | 1001 | 3.93 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CB | O51 | C | 1001 | 3.55 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CB | O52 | C | 1001 | 3.84 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CB | C5 | C | 1001 | 3.74 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CG | O51 | C | 1001 | 3.52 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CD | N4 | C | 1001 | 3.69 | H.Bond | C | 324-328 H: 5 | 328 | GLN | OE1 | O51 | C | 1001 | 3.7 | H.Bond | C | 324-328 H: 5 | 328 | GLN | OE1 | C5 | C | 1001 | 3.7 | van der Waals | C | 324-328 H: 5 | 328 | GLN | OE1 | C4 | C | 1001 | 3.39 | van der Waals | C | 324-328 H: 5 | 328 | GLN | OE1 | N4 | C | 1001 | 2.68 | H.Bond | C | 329-355 H: 1 | 331 | LYS | CE | O51 | C | 1001 | 3.1 | van der Waals | C | 329-355 H: 1 | 331 | LYS | NZ | O51 | C | 1001 | 2.64 | H.Bond | C | 329-355 H: 1 | 331 | LYS | NZ | C5 | C | 1001 | 3.67 | H.Bond | C | Water | 1023 | HOH | O | O52 | C | 1001 | 2.61 | H.Bond | C | Water | 1086 | HOH | O | N4 | C | 1001 | 2.51 | H.Bond | C | Water | 1123 | HOH | O | N3 | C | 1001 | 2.66 | H.Bond | |
| 2 / D |
> Structure: HHLHHH
+5w
> Sequence: SHRNVYQK
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AS1 /(1002) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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D | 29-34 H: 1 | 29 | SER | OG | N4 | D | 1002 | 3.17 | H.Bond | D | 89-103 H: 1 | 91 | HIS | CE1 | C3 | D | 1002 | 3.81 | van der Waals | D | 114-152 H: 1 | 115 | ARG | O | C2 | D | 1002 | 3.78 | van der Waals | D | 114-152 H: 1 | 115 | ARG | CB | C2 | D | 1002 | 3.75 | van der Waals | D | 114-152 H: 1 | 115 | ARG | CB | C1 | D | 1002 | 3.82 | van der Waals | D | 114-152 H: 1 | 115 | ARG | CB | N2 | D | 1002 | 3.87 | H.Bond | D | 114-152 H: 1 | 115 | ARG | NE | C | D | 1002 | 3.99 | H.Bond | D | 114-152 H: 1 | 115 | ARG | NE | N3 | D | 1002 | 3.96 | H.Bond | D | 114-152 H: 1 | 115 | ARG | CZ | N3 | D | 1002 | 3.65 | H.Bond | D | 114-152 H: 1 | 115 | ARG | NH1 | C | D | 1002 | 3.68 | H.Bond | D | 114-152 H: 1 | 115 | ARG | NH1 | N3 | D | 1002 | 2.98 | H.Bond | D | 114-152 H: 1 | 115 | ARG | NH1 | OG2 | D | 1002 | 3.72 | H.Bond | D | 114-152 H: 1 | 116 | ASN | CG | OD2 | D | 1002 | 3.49 | van der Waals | D | 114-152 H: 1 | 116 | ASN | OD1 | N2 | D | 1002 | 2.84 | H.Bond | D | 114-152 H: 1 | 116 | ASN | OD1 | C | D | 1002 | 3.35 | van der Waals | D | 114-152 H: 1 | 116 | ASN | OD1 | N1 | D | 1002 | 3.23 | H.Bond | D | 114-152 H: 1 | 116 | ASN | OD1 | OD2 | D | 1002 | 3.57 | H.Bond | D | 114-152 H: 1 | 116 | ASN | ND2 | CD | D | 1002 | 3.28 | H.Bond | D | 114-152 H: 1 | 116 | ASN | ND2 | OD1 | D | 1002 | 3.91 | H.Bond | D | 114-152 H: 1 | 116 | ASN | ND2 | OD2 | D | 1002 | 2.59 | H.Bond | D | 114-152 H: 1 | 119 | VAL | CB | C3 | D | 1002 | 3.9 | van der Waals | D | 114-152 H: 1 | 119 | VAL | CG2 | C3 | D | 1002 | 3.89 | van der Waals | D | No SSE | 323 | TYR | CB | OD2 | D | 1002 | 3.89 | van der Waals | D | No SSE | 323 | TYR | CD2 | OD2 | D | 1002 | 3.73 | van der Waals | D | No SSE | 323 | TYR | CE1 | O52 | D | 1002 | 3.2 | van der Waals | D | No SSE | 323 | TYR | CE2 | N2 | D | 1002 | 3.69 | H.Bond | D | No SSE | 323 | TYR | CE2 | C | D | 1002 | 3.68 | van der Waals | D | No SSE | 323 | TYR | CZ | O52 | D | 1002 | 3.21 | van der Waals | D | No SSE | 323 | TYR | CZ | C1 | D | 1002 | 3.71 | van der Waals | D | No SSE | 323 | TYR | CZ | N2 | D | 1002 | 3.61 | H.Bond | D | No SSE | 323 | TYR | OH | O52 | D | 1002 | 2.38 | H.Bond | D | No SSE | 323 | TYR | OH | C5 | D | 1002 | 3.19 | van der Waals | D | No SSE | 323 | TYR | OH | C4 | D | 1002 | 3.46 | van der Waals | D | No SSE | 323 | TYR | OH | C2 | D | 1002 | 3.65 | van der Waals | D | No SSE | 323 | TYR | OH | C1 | D | 1002 | 3.29 | van der Waals | D | No SSE | 323 | TYR | OH | N2 | D | 1002 | 3.69 | H.Bond | D | 324-328 H: 5 | 328 | GLN | N | O52 | D | 1002 | 3.94 | H.Bond | D | 324-328 H: 5 | 328 | GLN | CA | O51 | D | 1002 | 3.57 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CA | O52 | D | 1002 | 3.81 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CA | C5 | D | 1002 | 3.95 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CB | O51 | D | 1002 | 3.59 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CB | O52 | D | 1002 | 3.83 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CB | C5 | D | 1002 | 3.77 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CG | O51 | D | 1002 | 3.59 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CD | N4 | D | 1002 | 3.7 | H.Bond | D | 324-328 H: 5 | 328 | GLN | OE1 | O51 | D | 1002 | 3.67 | H.Bond | D | 324-328 H: 5 | 328 | GLN | OE1 | C5 | D | 1002 | 3.65 | van der Waals | D | 324-328 H: 5 | 328 | GLN | OE1 | C4 | D | 1002 | 3.38 | van der Waals | D | 324-328 H: 5 | 328 | GLN | OE1 | N4 | D | 1002 | 2.62 | H.Bond | D | 329-355 H: 1 | 331 | LYS | CE | O51 | D | 1002 | 2.94 | van der Waals | D | 329-355 H: 1 | 331 | LYS | NZ | O51 | D | 1002 | 2.76 | H.Bond | D | 329-355 H: 1 | 331 | LYS | NZ | C5 | D | 1002 | 3.77 | H.Bond | D | Water | 1024 | HOH | O | O52 | D | 1002 | 2.81 | H.Bond | D | Water | 1037 | HOH | O | N4 | D | 1002 | 2.98 | H.Bond | D | Water | 1151 | HOH | O | OG1 | D | 1002 | 2.93 | H.Bond | D | Water | 1151 | HOH | O | CB | D | 1002 | 2.91 | H.Bond | D | Water | 1152 | HOH | O | N4 | D | 1002 | 2.72 | H.Bond | D | Water | 1153 | HOH | O | N3 | D | 1002 | 2.81 | H.Bond | |
| 3 / B |
> Structure: HHLHHH
+4w
> Sequence: SHRNVYQK
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AS1 /(1003) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | 29-34 H: 1 | 29 | SER | CB | N4 | B | 1003 | 3.96 | H.Bond | B | 29-34 H: 1 | 29 | SER | OG | N4 | B | 1003 | 3.19 | H.Bond | B | 89-103 H: 1 | 91 | HIS | CE1 | C3 | B | 1003 | 3.82 | van der Waals | B | 114-152 H: 1 | 115 | ARG | O | C2 | B | 1003 | 3.8 | van der Waals | B | 114-152 H: 1 | 115 | ARG | CB | C2 | B | 1003 | 3.84 | van der Waals | B | 114-152 H: 1 | 115 | ARG | CB | C1 | B | 1003 | 3.88 | van der Waals | B | 114-152 H: 1 | 115 | ARG | CB | N2 | B | 1003 | 3.95 | H.Bond | B | 114-152 H: 1 | 115 | ARG | NH2 | N3 | B | 1003 | 3.39 | H.Bond | B | 114-152 H: 1 | 116 | ASN | CG | OD2 | B | 1003 | 3.53 | van der Waals | B | 114-152 H: 1 | 116 | ASN | OD1 | C1 | B | 1003 | 3.96 | van der Waals | B | 114-152 H: 1 | 116 | ASN | OD1 | N2 | B | 1003 | 2.78 | H.Bond | B | 114-152 H: 1 | 116 | ASN | OD1 | C | B | 1003 | 3.31 | van der Waals | B | 114-152 H: 1 | 116 | ASN | OD1 | N1 | B | 1003 | 3.23 | H.Bond | B | 114-152 H: 1 | 116 | ASN | OD1 | OD2 | B | 1003 | 3.6 | H.Bond | B | 114-152 H: 1 | 116 | ASN | ND2 | CD | B | 1003 | 3.51 | H.Bond | B | 114-152 H: 1 | 116 | ASN | ND2 | OD2 | B | 1003 | 2.65 | H.Bond | B | 114-152 H: 1 | 119 | VAL | CB | C3 | B | 1003 | 3.82 | van der Waals | B | 114-152 H: 1 | 119 | VAL | CG2 | C3 | B | 1003 | 3.9 | van der Waals | B | No SSE | 323 | TYR | CD2 | OD2 | B | 1003 | 3.95 | van der Waals | B | No SSE | 323 | TYR | CE1 | O52 | B | 1003 | 3.5 | van der Waals | B | No SSE | 323 | TYR | CE2 | N2 | B | 1003 | 3.74 | H.Bond | B | No SSE | 323 | TYR | CE2 | C | B | 1003 | 3.71 | van der Waals | B | No SSE | 323 | TYR | CZ | O52 | B | 1003 | 3.47 | van der Waals | B | No SSE | 323 | TYR | CZ | C1 | B | 1003 | 3.79 | van der Waals | B | No SSE | 323 | TYR | CZ | N2 | B | 1003 | 3.62 | H.Bond | B | No SSE | 323 | TYR | OH | O52 | B | 1003 | 2.58 | H.Bond | B | No SSE | 323 | TYR | OH | C5 | B | 1003 | 3.44 | van der Waals | B | No SSE | 323 | TYR | OH | C4 | B | 1003 | 3.71 | van der Waals | B | No SSE | 323 | TYR | OH | C2 | B | 1003 | 3.8 | van der Waals | B | No SSE | 323 | TYR | OH | C1 | B | 1003 | 3.48 | van der Waals | B | No SSE | 323 | TYR | OH | N2 | B | 1003 | 3.8 | H.Bond | B | 324-328 H: 5 | 328 | GLN | N | O52 | B | 1003 | 3.91 | H.Bond | B | 324-328 H: 5 | 328 | GLN | CA | O51 | B | 1003 | 3.59 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CA | O52 | B | 1003 | 3.72 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CA | C5 | B | 1003 | 3.93 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CB | O51 | B | 1003 | 3.72 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CB | O52 | B | 1003 | 3.83 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CB | C5 | B | 1003 | 3.85 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CG | O51 | B | 1003 | 3.56 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CG | C5 | B | 1003 | 3.96 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CD | N4 | B | 1003 | 3.83 | H.Bond | B | 324-328 H: 5 | 328 | GLN | OE1 | O51 | B | 1003 | 3.75 | H.Bond | B | 324-328 H: 5 | 328 | GLN | OE1 | C5 | B | 1003 | 3.64 | van der Waals | B | 324-328 H: 5 | 328 | GLN | OE1 | C4 | B | 1003 | 3.39 | van der Waals | B | 324-328 H: 5 | 328 | GLN | OE1 | N4 | B | 1003 | 2.8 | H.Bond | B | 329-355 H: 1 | 331 | LYS | CE | O51 | B | 1003 | 2.99 | van der Waals | B | 329-355 H: 1 | 331 | LYS | NZ | O51 | B | 1003 | 2.73 | H.Bond | B | 329-355 H: 1 | 331 | LYS | NZ | C5 | B | 1003 | 3.76 | H.Bond | B | Water | 1007 | HOH | O | O52 | B | 1003 | 2.89 | H.Bond | B | Water | 1059 | HOH | O | N4 | B | 1003 | 2.88 | H.Bond | B | Water | 1077 | HOH | O | N3 | B | 1003 | 2.74 | H.Bond | B | Water | 1092 | HOH | O | N4 | B | 1003 | 2.71 | H.Bond | |
| 4 / A |
> Structure: HHLHH
+6w
> Sequence: SRNVYQK
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AS1 /(1004) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | 29-34 H: 1 | 29 | SER | CB | N4 | A | 1004 | 3.91 | H.Bond | A | 29-34 H: 1 | 29 | SER | OG | N4 | A | 1004 | 3.15 | H.Bond | A | 114-152 H: 1 | 115 | ARG | O | C2 | A | 1004 | 3.95 | van der Waals | A | 114-152 H: 1 | 115 | ARG | CB | C2 | A | 1004 | 3.9 | van der Waals | A | 114-152 H: 1 | 115 | ARG | CB | C1 | A | 1004 | 3.67 | van der Waals | A | 114-152 H: 1 | 115 | ARG | CB | N2 | A | 1004 | 3.92 | H.Bond | A | 114-152 H: 1 | 116 | ASN | CG | OD2 | A | 1004 | 3.59 | van der Waals | A | 114-152 H: 1 | 116 | ASN | OD1 | C1 | A | 1004 | 3.92 | van der Waals | A | 114-152 H: 1 | 116 | ASN | OD1 | N2 | A | 1004 | 2.79 | H.Bond | A | 114-152 H: 1 | 116 | ASN | OD1 | C | A | 1004 | 3.33 | van der Waals | A | 114-152 H: 1 | 116 | ASN | OD1 | N1 | A | 1004 | 3.3 | H.Bond | A | 114-152 H: 1 | 116 | ASN | OD1 | OD2 | A | 1004 | 3.68 | H.Bond | A | 114-152 H: 1 | 116 | ASN | ND2 | CD | A | 1004 | 3.51 | H.Bond | A | 114-152 H: 1 | 116 | ASN | ND2 | OD2 | A | 1004 | 2.68 | H.Bond | A | 114-152 H: 1 | 119 | VAL | CB | C3 | A | 1004 | 3.96 | van der Waals | A | 114-152 H: 1 | 119 | VAL | CG1 | C2 | A | 1004 | 3.99 | van der Waals | A | 114-152 H: 1 | 119 | VAL | CG2 | C3 | A | 1004 | 3.99 | van der Waals | A | No SSE | 323 | TYR | CD2 | OD2 | A | 1004 | 3.95 | van der Waals | A | No SSE | 323 | TYR | CE1 | O52 | A | 1004 | 3.45 | van der Waals | A | No SSE | 323 | TYR | CE2 | N2 | A | 1004 | 3.54 | H.Bond | A | No SSE | 323 | TYR | CE2 | C | A | 1004 | 3.79 | van der Waals | A | No SSE | 323 | TYR | CE2 | N1 | A | 1004 | 3.98 | H.Bond | A | No SSE | 323 | TYR | CZ | O52 | A | 1004 | 3.52 | van der Waals | A | No SSE | 323 | TYR | CZ | C2 | A | 1004 | 3.98 | van der Waals | A | No SSE | 323 | TYR | CZ | C1 | A | 1004 | 3.78 | van der Waals | A | No SSE | 323 | TYR | CZ | N2 | A | 1004 | 3.45 | H.Bond | A | No SSE | 323 | TYR | OH | O52 | A | 1004 | 2.69 | H.Bond | A | No SSE | 323 | TYR | OH | C5 | A | 1004 | 3.45 | van der Waals | A | No SSE | 323 | TYR | OH | C4 | A | 1004 | 3.67 | van der Waals | A | No SSE | 323 | TYR | OH | C2 | A | 1004 | 3.52 | van der Waals | A | No SSE | 323 | TYR | OH | C1 | A | 1004 | 3.43 | van der Waals | A | No SSE | 323 | TYR | OH | N2 | A | 1004 | 3.6 | H.Bond | A | 324-328 H: 5 | 328 | GLN | CA | O51 | A | 1004 | 3.64 | van der Waals | A | 324-328 H: 5 | 328 | GLN | CA | O52 | A | 1004 | 3.91 | van der Waals | A | 324-328 H: 5 | 328 | GLN | CB | O51 | A | 1004 | 3.76 | van der Waals | A | 324-328 H: 5 | 328 | GLN | CB | C5 | A | 1004 | 3.98 | van der Waals | A | 324-328 H: 5 | 328 | GLN | CG | O51 | A | 1004 | 3.58 | van der Waals | A | 324-328 H: 5 | 328 | GLN | CD | N4 | A | 1004 | 3.81 | H.Bond | A | 324-328 H: 5 | 328 | GLN | OE1 | O51 | A | 1004 | 3.69 | H.Bond | A | 324-328 H: 5 | 328 | GLN | OE1 | C5 | A | 1004 | 3.66 | van der Waals | A | 324-328 H: 5 | 328 | GLN | OE1 | C4 | A | 1004 | 3.33 | van der Waals | A | 324-328 H: 5 | 328 | GLN | OE1 | N4 | A | 1004 | 2.79 | H.Bond | A | 329-355 H: 1 | 331 | LYS | CE | O51 | A | 1004 | 2.96 | van der Waals | A | 329-355 H: 1 | 331 | LYS | NZ | O51 | A | 1004 | 2.69 | H.Bond | A | 329-355 H: 1 | 331 | LYS | NZ | C5 | A | 1004 | 3.66 | H.Bond | A | Water | 1044 | HOH | O | O52 | A | 1004 | 2.73 | H.Bond | A | Water | 1060 | HOH | O | N4 | A | 1004 | 2.76 | H.Bond | A | Water | 1140 | HOH | O | N4 | A | 1004 | 2.85 | H.Bond | A | Water | 1165 | HOH | O | N3 | A | 1004 | 2.73 | H.Bond | A | Water | 1210 | HOH | O | OG2 | A | 1004 | 2.68 | H.Bond | A | Water | 1211 | HOH | O | N3 | A | 1004 | 2.66 | H.Bond | A | Water | 1211 | HOH | O | OG1 | A | 1004 | 2.64 | H.Bond | |
Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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3 | 1TJW | Argininosuccinate lyase | x-ray | 2.0 | 0.190
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / C |
> Structure: HLHLHH
+6w
> Sequence: SSRNVAYQK
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AS1 /(1001) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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C | 29-34 H: 1 | 29 | SER | OG | N4 | C | 1001 | 3.2 | H.Bond | C | 114-152 H: 1 | 114 | SER | CA | OD1 | C | 1001 | 3.96 | van der Waals | C | 114-152 H: 1 | 114 | SER | CB | OD1 | C | 1001 | 3.21 | van der Waals | C | 114-152 H: 1 | 114 | SER | OG | CD | C | 1001 | 3.25 | van der Waals | C | 114-152 H: 1 | 114 | SER | OG | OD1 | C | 1001 | 2.67 | H.Bond | C | 114-152 H: 1 | 114 | SER | OG | OD2 | C | 1001 | 3.41 | H.Bond | C | 114-152 H: 1 | 115 | ARG | N | OD2 | C | 1001 | 3.35 | H.Bond | C | 114-152 H: 1 | 115 | ARG | O | C2 | C | 1001 | 3.93 | van der Waals | C | 114-152 H: 1 | 115 | ARG | CB | C2 | C | 1001 | 3.88 | van der Waals | C | 114-152 H: 1 | 115 | ARG | CB | C1 | C | 1001 | 3.87 | van der Waals | C | 114-152 H: 1 | 115 | ARG | CB | N2 | C | 1001 | 3.36 | H.Bond | C | 114-152 H: 1 | 115 | ARG | CB | C | C | 1001 | 3.75 | van der Waals | C | 114-152 H: 1 | 115 | ARG | CB | N1 | C | 1001 | 3.94 | H.Bond | C | 114-152 H: 1 | 115 | ARG | CB | OD2 | C | 1001 | 3.9 | van der Waals | C | 114-152 H: 1 | 115 | ARG | CG | OD2 | C | 1001 | 3.91 | van der Waals | C | 114-152 H: 1 | 116 | ASN | OD1 | N2 | C | 1001 | 3.04 | H.Bond | C | 114-152 H: 1 | 116 | ASN | OD1 | C | C | 1001 | 3.53 | van der Waals | C | 114-152 H: 1 | 116 | ASN | OD1 | N1 | C | 1001 | 3.18 | H.Bond | C | 114-152 H: 1 | 116 | ASN | OD1 | CA | C | 1001 | 3.62 | van der Waals | C | 114-152 H: 1 | 119 | VAL | CB | C3 | C | 1001 | 3.99 | van der Waals | C | 114-152 H: 1 | 119 | VAL | CG1 | C2 | C | 1001 | 3.95 | van der Waals | C | No SSE | 205 | ALA | CB | OD1 | C | 1001 | 3.46 | van der Waals | C | No SSE | 323 | TYR | CE1 | O52 | C | 1001 | 3.62 | van der Waals | C | No SSE | 323 | TYR | CE2 | OG2 | C | 1001 | 3.95 | van der Waals | C | No SSE | 323 | TYR | CZ | O52 | C | 1001 | 3.61 | van der Waals | C | No SSE | 323 | TYR | CZ | C2 | C | 1001 | 3.82 | van der Waals | C | No SSE | 323 | TYR | CZ | C1 | C | 1001 | 3.68 | van der Waals | C | No SSE | 323 | TYR | CZ | N2 | C | 1001 | 3.94 | H.Bond | C | No SSE | 323 | TYR | OH | O52 | C | 1001 | 2.72 | H.Bond | C | No SSE | 323 | TYR | OH | C5 | C | 1001 | 3.52 | van der Waals | C | No SSE | 323 | TYR | OH | C4 | C | 1001 | 3.62 | van der Waals | C | No SSE | 323 | TYR | OH | C2 | C | 1001 | 3.37 | van der Waals | C | No SSE | 323 | TYR | OH | C1 | C | 1001 | 3.23 | van der Waals | C | No SSE | 323 | TYR | OH | N2 | C | 1001 | 3.97 | H.Bond | C | 324-328 H: 5 | 328 | GLN | N | O52 | C | 1001 | 3.88 | H.Bond | C | 324-328 H: 5 | 328 | GLN | CA | O51 | C | 1001 | 3.51 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CA | O52 | C | 1001 | 3.73 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CA | C5 | C | 1001 | 3.86 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CB | O51 | C | 1001 | 3.6 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CB | O52 | C | 1001 | 3.84 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CB | C5 | C | 1001 | 3.76 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CG | O51 | C | 1001 | 3.61 | van der Waals | C | 324-328 H: 5 | 328 | GLN | CD | N4 | C | 1001 | 3.86 | H.Bond | C | 324-328 H: 5 | 328 | GLN | OE1 | O51 | C | 1001 | 3.71 | H.Bond | C | 324-328 H: 5 | 328 | GLN | OE1 | C5 | C | 1001 | 3.69 | van der Waals | C | 324-328 H: 5 | 328 | GLN | OE1 | C4 | C | 1001 | 3.39 | van der Waals | C | 324-328 H: 5 | 328 | GLN | OE1 | N4 | C | 1001 | 2.81 | H.Bond | C | 329-355 H: 1 | 331 | LYS | CE | O51 | C | 1001 | 3.14 | van der Waals | C | 329-355 H: 1 | 331 | LYS | NZ | O51 | C | 1001 | 2.77 | H.Bond | C | 329-355 H: 1 | 331 | LYS | NZ | O52 | C | 1001 | 3.97 | H.Bond | C | 329-355 H: 1 | 331 | LYS | NZ | C5 | C | 1001 | 3.66 | H.Bond | C | Water | 1064 | HOH | O | O52 | C | 1001 | 2.87 | H.Bond | C | Water | 1068 | HOH | O | N4 | C | 1001 | 2.96 | H.Bond | C | Water | 1078 | HOH | O | N4 | C | 1001 | 2.66 | H.Bond | C | Water | 1167 | HOH | O | OD2 | C | 1001 | 2.57 | H.Bond | C | Water | 1236 | HOH | O | N3 | C | 1001 | 2.92 | H.Bond | C | Water | 1256 | HOH | O | OG2 | C | 1001 | 2.74 | H.Bond | |
| 2 / D |
> Structure: HLHLHH
+4w
> Sequence: SSRNAYQK
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AS1 /(1002) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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D | 29-34 H: 1 | 29 | SER | OG | N4 | D | 1002 | 3.29 | H.Bond | D | 114-152 H: 1 | 114 | SER | CA | OD1 | D | 1002 | 3.93 | van der Waals | D | 114-152 H: 1 | 114 | SER | CB | OD1 | D | 1002 | 3.26 | van der Waals | D | 114-152 H: 1 | 114 | SER | OG | CD | D | 1002 | 3.15 | van der Waals | D | 114-152 H: 1 | 114 | SER | OG | OD1 | D | 1002 | 2.57 | H.Bond | D | 114-152 H: 1 | 114 | SER | OG | OD2 | D | 1002 | 3.41 | H.Bond | D | 114-152 H: 1 | 115 | ARG | N | OD2 | D | 1002 | 3.36 | H.Bond | D | 114-152 H: 1 | 115 | ARG | O | C2 | D | 1002 | 3.89 | van der Waals | D | 114-152 H: 1 | 115 | ARG | CB | N2 | D | 1002 | 3.46 | H.Bond | D | 114-152 H: 1 | 115 | ARG | CB | C | D | 1002 | 3.75 | van der Waals | D | 114-152 H: 1 | 115 | ARG | CB | N1 | D | 1002 | 3.87 | H.Bond | D | 114-152 H: 1 | 115 | ARG | CB | OD2 | D | 1002 | 3.71 | van der Waals | D | 114-152 H: 1 | 115 | ARG | CG | OD2 | D | 1002 | 3.87 | van der Waals | D | 114-152 H: 1 | 116 | ASN | CG | N1 | D | 1002 | 3.82 | H.Bond | D | 114-152 H: 1 | 116 | ASN | CG | CA | D | 1002 | 3.98 | van der Waals | D | 114-152 H: 1 | 116 | ASN | OD1 | N2 | D | 1002 | 2.86 | H.Bond | D | 114-152 H: 1 | 116 | ASN | OD1 | C | D | 1002 | 3.25 | van der Waals | D | 114-152 H: 1 | 116 | ASN | OD1 | N1 | D | 1002 | 2.83 | H.Bond | D | 114-152 H: 1 | 116 | ASN | OD1 | CA | D | 1002 | 3.29 | van der Waals | D | No SSE | 205 | ALA | CB | OD1 | D | 1002 | 3.56 | van der Waals | D | No SSE | 323 | TYR | CE1 | O52 | D | 1002 | 3.54 | van der Waals | D | No SSE | 323 | TYR | CE2 | C1 | D | 1002 | 3.99 | van der Waals | D | No SSE | 323 | TYR | CE2 | N2 | D | 1002 | 3.92 | H.Bond | D | No SSE | 323 | TYR | CE2 | OG2 | D | 1002 | 3.99 | van der Waals | D | No SSE | 323 | TYR | CZ | O52 | D | 1002 | 3.49 | van der Waals | D | No SSE | 323 | TYR | CZ | C2 | D | 1002 | 3.85 | van der Waals | D | No SSE | 323 | TYR | CZ | C1 | D | 1002 | 3.58 | van der Waals | D | No SSE | 323 | TYR | CZ | N2 | D | 1002 | 3.88 | H.Bond | D | No SSE | 323 | TYR | OH | O52 | D | 1002 | 2.58 | H.Bond | D | No SSE | 323 | TYR | OH | C5 | D | 1002 | 3.42 | van der Waals | D | No SSE | 323 | TYR | OH | C4 | D | 1002 | 3.52 | van der Waals | D | No SSE | 323 | TYR | OH | C2 | D | 1002 | 3.37 | van der Waals | D | No SSE | 323 | TYR | OH | C1 | D | 1002 | 3.13 | van der Waals | D | No SSE | 323 | TYR | OH | N2 | D | 1002 | 3.93 | H.Bond | D | 324-328 H: 5 | 328 | GLN | N | O52 | D | 1002 | 3.87 | H.Bond | D | 324-328 H: 5 | 328 | GLN | CA | O51 | D | 1002 | 3.63 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CA | O52 | D | 1002 | 3.71 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CA | C5 | D | 1002 | 3.88 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CB | O51 | D | 1002 | 3.73 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CB | O52 | D | 1002 | 3.8 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CB | C5 | D | 1002 | 3.77 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CG | O51 | D | 1002 | 3.61 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CG | C5 | D | 1002 | 3.92 | van der Waals | D | 324-328 H: 5 | 328 | GLN | CD | N4 | D | 1002 | 3.67 | H.Bond | D | 324-328 H: 5 | 328 | GLN | OE1 | O51 | D | 1002 | 3.92 | H.Bond | D | 324-328 H: 5 | 328 | GLN | OE1 | C5 | D | 1002 | 3.75 | van der Waals | D | 324-328 H: 5 | 328 | GLN | OE1 | C4 | D | 1002 | 3.33 | van der Waals | D | 324-328 H: 5 | 328 | GLN | OE1 | N4 | D | 1002 | 2.65 | H.Bond | D | 329-355 H: 1 | 331 | LYS | CD | O51 | D | 1002 | 3.87 | van der Waals | D | 329-355 H: 1 | 331 | LYS | CE | O51 | D | 1002 | 3.17 | van der Waals | D | 329-355 H: 1 | 331 | LYS | NZ | O51 | D | 1002 | 2.67 | H.Bond | D | 329-355 H: 1 | 331 | LYS | NZ | C5 | D | 1002 | 3.69 | H.Bond | D | Water | 1044 | HOH | O | O52 | D | 1002 | 2.76 | H.Bond | D | Water | 1083 | HOH | O | N4 | D | 1002 | 2.9 | H.Bond | D | Water | 1097 | HOH | O | N4 | D | 1002 | 2.55 | H.Bond | D | Water | 1132 | HOH | O | OG2 | D | 1002 | 2.88 | H.Bond | |
| 3 / B |
> Structure: HLHLHH
+6w
> Sequence: SSRNVAYQK
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AS1 /(1003) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | 29-34 H: 1 | 29 | SER | OG | N4 | B | 1003 | 3.24 | H.Bond | B | 114-152 H: 1 | 114 | SER | CB | OD2 | B | 1003 | 3.55 | van der Waals | B | 114-152 H: 1 | 114 | SER | OG | CD | B | 1003 | 3.27 | van der Waals | B | 114-152 H: 1 | 114 | SER | OG | OD1 | B | 1003 | 3.37 | H.Bond | B | 114-152 H: 1 | 114 | SER | OG | OD2 | B | 1003 | 2.8 | H.Bond | B | 114-152 H: 1 | 115 | ARG | N | OD1 | B | 1003 | 3.3 | H.Bond | B | 114-152 H: 1 | 115 | ARG | O | C2 | B | 1003 | 3.86 | van der Waals | B | 114-152 H: 1 | 115 | ARG | CB | N2 | B | 1003 | 3.5 | H.Bond | B | 114-152 H: 1 | 115 | ARG | CB | C | B | 1003 | 3.75 | van der Waals | B | 114-152 H: 1 | 115 | ARG | CB | N1 | B | 1003 | 3.92 | H.Bond | B | 114-152 H: 1 | 115 | ARG | CB | OD1 | B | 1003 | 3.72 | van der Waals | B | 114-152 H: 1 | 115 | ARG | CG | OD1 | B | 1003 | 3.78 | van der Waals | B | 114-152 H: 1 | 116 | ASN | CG | N1 | B | 1003 | 3.93 | H.Bond | B | 114-152 H: 1 | 116 | ASN | OD1 | N2 | B | 1003 | 2.93 | H.Bond | B | 114-152 H: 1 | 116 | ASN | OD1 | C | B | 1003 | 3.4 | van der Waals | B | 114-152 H: 1 | 116 | ASN | OD1 | N1 | B | 1003 | 3.01 | H.Bond | B | 114-152 H: 1 | 116 | ASN | OD1 | CA | B | 1003 | 3.55 | van der Waals | B | 114-152 H: 1 | 119 | VAL | CB | C3 | B | 1003 | 3.97 | van der Waals | B | 114-152 H: 1 | 119 | VAL | CG1 | C2 | B | 1003 | 3.99 | van der Waals | B | No SSE | 205 | ALA | CB | OD2 | B | 1003 | 3.65 | van der Waals | B | No SSE | 323 | TYR | CE1 | O52 | B | 1003 | 3.65 | van der Waals | B | No SSE | 323 | TYR | CE1 | C2 | B | 1003 | 3.99 | van der Waals | B | No SSE | 323 | TYR | CE2 | OG1 | B | 1003 | 3.98 | van der Waals | B | No SSE | 323 | TYR | CZ | O52 | B | 1003 | 3.65 | van der Waals | B | No SSE | 323 | TYR | CZ | C2 | B | 1003 | 3.78 | van der Waals | B | No SSE | 323 | TYR | CZ | C1 | B | 1003 | 3.71 | van der Waals | B | No SSE | 323 | TYR | CZ | N2 | B | 1003 | 3.94 | H.Bond | B | No SSE | 323 | TYR | OH | O52 | B | 1003 | 2.75 | H.Bond | B | No SSE | 323 | TYR | OH | C5 | B | 1003 | 3.56 | van der Waals | B | No SSE | 323 | TYR | OH | C4 | B | 1003 | 3.61 | van der Waals | B | No SSE | 323 | TYR | OH | C2 | B | 1003 | 3.32 | van der Waals | B | No SSE | 323 | TYR | OH | C1 | B | 1003 | 3.24 | van der Waals | B | No SSE | 323 | TYR | OH | N2 | B | 1003 | 3.95 | H.Bond | B | 324-328 H: 5 | 328 | GLN | N | O52 | B | 1003 | 3.82 | H.Bond | B | 324-328 H: 5 | 328 | GLN | CA | O51 | B | 1003 | 3.5 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CA | O52 | B | 1003 | 3.64 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CA | C5 | B | 1003 | 3.81 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CB | O51 | B | 1003 | 3.65 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CB | O52 | B | 1003 | 3.81 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CB | C5 | B | 1003 | 3.76 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CG | O51 | B | 1003 | 3.57 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CG | C5 | B | 1003 | 3.97 | van der Waals | B | 324-328 H: 5 | 328 | GLN | CD | N4 | B | 1003 | 3.8 | H.Bond | B | 324-328 H: 5 | 328 | GLN | OE1 | O51 | B | 1003 | 3.7 | H.Bond | B | 324-328 H: 5 | 328 | GLN | OE1 | C5 | B | 1003 | 3.59 | van der Waals | B | 324-328 H: 5 | 328 | GLN | OE1 | C4 | B | 1003 | 3.28 | van der Waals | B | 324-328 H: 5 | 328 | GLN | OE1 | N4 | B | 1003 | 2.75 | H.Bond | B | 329-355 H: 1 | 331 | LYS | CE | O51 | B | 1003 | 2.79 | van der Waals | B | 329-355 H: 1 | 331 | LYS | NZ | O51 | B | 1003 | 2.58 | H.Bond | B | 329-355 H: 1 | 331 | LYS | NZ | C5 | B | 1003 | 3.57 | H.Bond | B | Water | 1046 | HOH | O | O52 | B | 1003 | 2.75 | H.Bond | B | Water | 1053 | HOH | O | N4 | B | 1003 | 2.78 | H.Bond | B | Water | 1054 | HOH | O | N4 | B | 1003 | 2.76 | H.Bond | B | Water | 1068 | HOH | O | OD1 | B | 1003 | 2.53 | H.Bond | B | Water | 1131 | HOH | O | N3 | B | 1003 | 2.93 | H.Bond | B | Water | 1147 | HOH | O | OD2 | B | 1003 | 2.86 | H.Bond | |